eclipse ti2 inverted widefield microscope Search Results


99
Nikon ti inverted microscope
Ti Inverted Microscope, supplied by Nikon, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Nikon ti eclipse inverted widefield microscope
Cell-based model system for evaluating HspB1 function. (A) HspB1 immunoblot of parental WT and CRISPR/Cas9 HspB1-null cells, followed by “rescue” constructs of WT HspB1, nonphosphorylatable Ser15,86A and phosphomimetic Ser15,86E HspB1s expressed in the HspB1-null cells, with vinculin loading control. (B) <t>Widefield</t> microscopy of immunofluorescent localization of the 3 HspB1 rescue constructs in cells on fibronectin-coated coverslips detects diffuse cytoplasmic distribution of HspB1. F-actin images (phalloidin) of the same cells are shown below. (C) Maximum intensity projections of confocal microscopy images of HspB1 immunolocalization (HspB1, green) and vinculin (magenta) in HspB1-null cells expressing the three rescue constructs of WT HspB1 and phosphomutant S15,86A and S15,86E HspB1s, on 47 µm × 47 µm micropattern islands. Insets show zoom Merge image (lower left boxed corner) cytoskeletal distribution of HspB1 detectable in WT and S15,86E HspB1 but not with S15,86A HspB1. Cytoskeletal distribution of HspB1 observed in 40% of WT HspB1 rescue cell images, 3% of S15,86A HspB1 rescue cell images, and 38% of S15,86E HspB1 rescue cell images. (D) Intensity line profiles from cell exterior toward interior (brackets) of vinculin (dashed magenta line) and HspB1 (solid green line). Scale bar 20 microns.
Ti Eclipse Inverted Widefield Microscope, supplied by Nikon, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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99
Nikon eclipse ti 2 widefield inverted microscope
Cell-based model system for evaluating HspB1 function. (A) HspB1 immunoblot of parental WT and CRISPR/Cas9 HspB1-null cells, followed by “rescue” constructs of WT HspB1, nonphosphorylatable Ser15,86A and phosphomimetic Ser15,86E HspB1s expressed in the HspB1-null cells, with vinculin loading control. (B) <t>Widefield</t> microscopy of immunofluorescent localization of the 3 HspB1 rescue constructs in cells on fibronectin-coated coverslips detects diffuse cytoplasmic distribution of HspB1. F-actin images (phalloidin) of the same cells are shown below. (C) Maximum intensity projections of confocal microscopy images of HspB1 immunolocalization (HspB1, green) and vinculin (magenta) in HspB1-null cells expressing the three rescue constructs of WT HspB1 and phosphomutant S15,86A and S15,86E HspB1s, on 47 µm × 47 µm micropattern islands. Insets show zoom Merge image (lower left boxed corner) cytoskeletal distribution of HspB1 detectable in WT and S15,86E HspB1 but not with S15,86A HspB1. Cytoskeletal distribution of HspB1 observed in 40% of WT HspB1 rescue cell images, 3% of S15,86A HspB1 rescue cell images, and 38% of S15,86E HspB1 rescue cell images. (D) Intensity line profiles from cell exterior toward interior (brackets) of vinculin (dashed magenta line) and HspB1 (solid green line). Scale bar 20 microns.
Eclipse Ti 2 Widefield Inverted Microscope, supplied by Nikon, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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98
Carl Zeiss axio observer z1 widefield inverted microscope
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Axio Observer Z1 Widefield Inverted Microscope, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 98/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/axio observer z1 widefield inverted microscope/product/Carl Zeiss
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axio observer z1 widefield inverted microscope - by Bioz Stars, 2026-06
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Carl Zeiss inverted widefield zeiss axio observer microscope
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Inverted Widefield Zeiss Axio Observer Microscope, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
Carl Zeiss axiovert 200m inverted widefield microscope
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Axiovert 200m Inverted Widefield Microscope, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/axiovert 200m inverted widefield microscope/product/Carl Zeiss
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axiovert 200m inverted widefield microscope - by Bioz Stars, 2026-06
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Carl Zeiss inverted widefield fluorescence microscope zeiss axio observer
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Inverted Widefield Fluorescence Microscope Zeiss Axio Observer, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/inverted widefield fluorescence microscope zeiss axio observer/product/Carl Zeiss
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Carl Zeiss axiovert 40 cfl inverted widefield fluorescence microscope
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Axiovert 40 Cfl Inverted Widefield Fluorescence Microscope, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/axiovert 40 cfl inverted widefield fluorescence microscope/product/Carl Zeiss
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axiovert 40 cfl inverted widefield fluorescence microscope - by Bioz Stars, 2026-06
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90
Carl Zeiss axioobserver.z1 inverted widefield fluorescence microscope
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Axioobserver.Z1 Inverted Widefield Fluorescence Microscope, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/axioobserver.z1 inverted widefield fluorescence microscope/product/Carl Zeiss
Average 90 stars, based on 1 article reviews
axioobserver.z1 inverted widefield fluorescence microscope - by Bioz Stars, 2026-06
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Carl Zeiss inverted widefield epi-fluorescence microscope zeiss axio observer.z1/7
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Inverted Widefield Epi Fluorescence Microscope Zeiss Axio Observer.Z1/7, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/inverted widefield epi-fluorescence microscope zeiss axio observer.z1/7/product/Carl Zeiss
Average 90 stars, based on 1 article reviews
inverted widefield epi-fluorescence microscope zeiss axio observer.z1/7 - by Bioz Stars, 2026-06
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Carl Zeiss widefield fluorescent inverted microscope axiovert z1
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Widefield Fluorescent Inverted Microscope Axiovert Z1, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/widefield fluorescent inverted microscope axiovert z1/product/Carl Zeiss
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widefield fluorescent inverted microscope axiovert z1 - by Bioz Stars, 2026-06
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99
Danaher Inc dmi8 inverted widefield microscope
All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using <t>widefield</t> microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.
Dmi8 Inverted Widefield Microscope, supplied by Danaher Inc, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dmi8 inverted widefield microscope/product/Danaher Inc
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dmi8 inverted widefield microscope - by Bioz Stars, 2026-06
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Image Search Results


Cell-based model system for evaluating HspB1 function. (A) HspB1 immunoblot of parental WT and CRISPR/Cas9 HspB1-null cells, followed by “rescue” constructs of WT HspB1, nonphosphorylatable Ser15,86A and phosphomimetic Ser15,86E HspB1s expressed in the HspB1-null cells, with vinculin loading control. (B) Widefield microscopy of immunofluorescent localization of the 3 HspB1 rescue constructs in cells on fibronectin-coated coverslips detects diffuse cytoplasmic distribution of HspB1. F-actin images (phalloidin) of the same cells are shown below. (C) Maximum intensity projections of confocal microscopy images of HspB1 immunolocalization (HspB1, green) and vinculin (magenta) in HspB1-null cells expressing the three rescue constructs of WT HspB1 and phosphomutant S15,86A and S15,86E HspB1s, on 47 µm × 47 µm micropattern islands. Insets show zoom Merge image (lower left boxed corner) cytoskeletal distribution of HspB1 detectable in WT and S15,86E HspB1 but not with S15,86A HspB1. Cytoskeletal distribution of HspB1 observed in 40% of WT HspB1 rescue cell images, 3% of S15,86A HspB1 rescue cell images, and 38% of S15,86E HspB1 rescue cell images. (D) Intensity line profiles from cell exterior toward interior (brackets) of vinculin (dashed magenta line) and HspB1 (solid green line). Scale bar 20 microns.

Journal: Molecular Biology of the Cell

Article Title: Phosphorylation of the small heat shock protein HspB1 regulates cytoskeletal recruitment and cell motility

doi: 10.1091/mbc.E22-02-0057

Figure Lengend Snippet: Cell-based model system for evaluating HspB1 function. (A) HspB1 immunoblot of parental WT and CRISPR/Cas9 HspB1-null cells, followed by “rescue” constructs of WT HspB1, nonphosphorylatable Ser15,86A and phosphomimetic Ser15,86E HspB1s expressed in the HspB1-null cells, with vinculin loading control. (B) Widefield microscopy of immunofluorescent localization of the 3 HspB1 rescue constructs in cells on fibronectin-coated coverslips detects diffuse cytoplasmic distribution of HspB1. F-actin images (phalloidin) of the same cells are shown below. (C) Maximum intensity projections of confocal microscopy images of HspB1 immunolocalization (HspB1, green) and vinculin (magenta) in HspB1-null cells expressing the three rescue constructs of WT HspB1 and phosphomutant S15,86A and S15,86E HspB1s, on 47 µm × 47 µm micropattern islands. Insets show zoom Merge image (lower left boxed corner) cytoskeletal distribution of HspB1 detectable in WT and S15,86E HspB1 but not with S15,86A HspB1. Cytoskeletal distribution of HspB1 observed in 40% of WT HspB1 rescue cell images, 3% of S15,86A HspB1 rescue cell images, and 38% of S15,86E HspB1 rescue cell images. (D) Intensity line profiles from cell exterior toward interior (brackets) of vinculin (dashed magenta line) and HspB1 (solid green line). Scale bar 20 microns.

Article Snippet: A Nikon Ti Eclipse inverted widefield microscope with 10× objective (NA 0.45, PlanApo) and Perfect Focus System was used for DIC imaging (with Kohler illumination) and acquisition with Nikon Elements v4.6 software and Andor NeoZyla camera.

Techniques: Western Blot, CRISPR, Construct, Control, Microscopy, Confocal Microscopy, Expressing

HspB1 affects cell spreading in a phosphodependent manner. (A) immunofluorescence microscopy of cells spread on glass coverslips coated with 10 µg/ml fibronectin. Subcellular distribution of HspB1 (top row, cytoplasmic) and vinculin (bottom row, FA) in WT and HspB1-null cells, and in null cells expressing the WT HspB1 rescue construct. (B) Graph of cell area measurements shows the decreased cell spread in HspB1-null cells is rescued by expressing WT HspB1 rescue construct. (C) immunofluorescence localization of HspB1 (top row) in HspB1-null cells, and in null cells expressing the rescue constructs for WT HspB1 and nonphosphorylatable S15,86A HspB1 and phosphomimetic S15,86E HspB1. Vinculin immunofluorescent localizations in same cells (bottom row). (D) Graph of cell area measurements show increased cell spreading in cells expressing WT and S15,86E HspB1, but no difference between HspB1-null cells and cells expressing S15,86A HspB1. Scale bar of 20 microns for widefield fluorescent images. Graphs are mean with standard deviations and unpaired t tests were used to determine p-values of ** p < 0.01, *** p < 0.001.

Journal: Molecular Biology of the Cell

Article Title: Phosphorylation of the small heat shock protein HspB1 regulates cytoskeletal recruitment and cell motility

doi: 10.1091/mbc.E22-02-0057

Figure Lengend Snippet: HspB1 affects cell spreading in a phosphodependent manner. (A) immunofluorescence microscopy of cells spread on glass coverslips coated with 10 µg/ml fibronectin. Subcellular distribution of HspB1 (top row, cytoplasmic) and vinculin (bottom row, FA) in WT and HspB1-null cells, and in null cells expressing the WT HspB1 rescue construct. (B) Graph of cell area measurements shows the decreased cell spread in HspB1-null cells is rescued by expressing WT HspB1 rescue construct. (C) immunofluorescence localization of HspB1 (top row) in HspB1-null cells, and in null cells expressing the rescue constructs for WT HspB1 and nonphosphorylatable S15,86A HspB1 and phosphomimetic S15,86E HspB1. Vinculin immunofluorescent localizations in same cells (bottom row). (D) Graph of cell area measurements show increased cell spreading in cells expressing WT and S15,86E HspB1, but no difference between HspB1-null cells and cells expressing S15,86A HspB1. Scale bar of 20 microns for widefield fluorescent images. Graphs are mean with standard deviations and unpaired t tests were used to determine p-values of ** p < 0.01, *** p < 0.001.

Article Snippet: A Nikon Ti Eclipse inverted widefield microscope with 10× objective (NA 0.45, PlanApo) and Perfect Focus System was used for DIC imaging (with Kohler illumination) and acquisition with Nikon Elements v4.6 software and Andor NeoZyla camera.

Techniques: Immunofluorescence, Microscopy, Expressing, Construct

All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using widefield microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.

Journal: bioRxiv

Article Title: RecN and RecA orchestrate an ordered DNA supercompaction response following ciprofloxacin exposure in Escherichia coli

doi: 10.1101/2024.11.15.623168

Figure Lengend Snippet: All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using widefield microscopy. ( A ) Representative images of HU-mCherry labelled (green) wild-type cells at 0, 8, and 16 minutes after CIP exposure, showing DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 34-141 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells were immobilized on agar pads and imaged using spinning disk microscopy. Results shown are from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.

Article Snippet: To examine the cells’ immediate response to CIP exposure, we employed a microfluidic setup to image cells using a Zeiss Axio Observer Z1 widefield inverted microscope with a 63x oil objective (Zeiss Plan Apochromat 1.4 NA, DIC), a Colibri 7 LED light source, a Hamamatsu ORCA-Flash4.0 V3 digital CMOS camera, as well as a heated incubation chamber and mounting frame, both maintained at 37°C.

Techniques: Live Cell Imaging, Microscopy, Fluorescence

All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using widefield microscopy. ( A ) Representative images of ΔrecN cells at 0, 8, and 16 minutes after CIP exposure, showing HU-mCherry fluorescence (green) to represent DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 17-61 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells immobilized on agar pads and imaged using spinning disk microscopy. Results are shown from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.

Journal: bioRxiv

Article Title: RecN and RecA orchestrate an ordered DNA supercompaction response following ciprofloxacin exposure in Escherichia coli

doi: 10.1101/2024.11.15.623168

Figure Lengend Snippet: All cells were grown in LB at 37°C and imaged at 2-minute intervals using live-cell imaging. ( A and B ) Cells were immobilized in microfluidic channel slides and imaged using widefield microscopy. ( A ) Representative images of ΔrecN cells at 0, 8, and 16 minutes after CIP exposure, showing HU-mCherry fluorescence (green) to represent DNA distribution. Scale bar: 5 µm. ( B ) Analysis of DNA distribution along the cells’ long axis before and after CIP, quantified by measuring the distance between the outer bounds of symmetrical fluorescence peaks at 80% of maximum averaged intensity for each time point. Results are averaged from 17-61 cells from a single representative biological replicate (see Materials and methods for detailed explanation). ( C and D ) Cells immobilized on agar pads and imaged using spinning disk microscopy. Results are shown from images captured 12, 14, 16, and 18 minutes after CIP exposure, averaged from 40 tracked cells from a single representative biological replicate. ( C ) Average HU-mCherry fluorescence intensity along the cells’ long axis. ( D ) Kymograph heat map of relative HU-mCherry intensity distribution over time. A.u., arbitrary unit.

Article Snippet: To examine the cells’ immediate response to CIP exposure, we employed a microfluidic setup to image cells using a Zeiss Axio Observer Z1 widefield inverted microscope with a 63x oil objective (Zeiss Plan Apochromat 1.4 NA, DIC), a Colibri 7 LED light source, a Hamamatsu ORCA-Flash4.0 V3 digital CMOS camera, as well as a heated incubation chamber and mounting frame, both maintained at 37°C.

Techniques: Live Cell Imaging, Microscopy, Fluorescence